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Species belonging to selected taxon:
Lottia gigantea
ABOUT THIS RECORD
ID:
MNEST038867
species:
Lottia gigantea
miRNA family:
mir-124
source:
miRBase, original name:
lgi-mir-124
(
MI0010120
)
Taxonomy by NCBI:
Lottia gigantea
Lottia
Lottiidae
Acmaeioidea
Nacellina
Docoglossa
Eogastropoda
Gastropoda
Mollusca
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAAGGCACGCGGTGAATGCCA
miRNA*
GTGTTCACTGTGAAAGCCTTGGT
mismatches:
2
bulges:
2
View larger
pre-miRNA
AATCCAAAATGGCGGATCTGTTA
GTGTTCACTGTGAAAGCCTTGGT
GTAATTAAAACTAT
TAAGGCACGCGGTGAATGCCA
ATAGGTCGTCAATATCTTC
T
dot-bracket secondary structure
.........(((((.(((((((.
((((((((((((...((((((((
((.......)).))
)))))).)))))))))))).)
)))))))))))........
.
SIMILARITIES
miRBase
cte-mir-124
:
0.00000002
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-124: 0.0000004
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"